See paper by Hugo Bellen, Jane Hubbard, Ruth Lehmann, Hiten Madhani, Lila Solnica-Krezel and Michelle Southard-Smith.
Introducing Wormicloud, a text summarization tool
We are happy to introduce Wormicloud, a new tool that summarizes scientific articles in a graphical way through word clouds. This tool is aimed at facilitating the discovery of new experimental results not yet curated by model organism databases and is designed for both researchers and biocurators. Wormicloud is customized for the Caenorhabditis elegans literature and provides several advantages over existing solutions, including being able to perform full-text searches through Textpresso, which provides more accurate results than other existing literature search engines.
Wormicloud is integrated through direct links from gene interaction pages in WormBase. Additionally, it allows analysis on the gene sets obtained from literature searches with other WormBase tools such as SimpleMine and Gene Set Enrichment. URL: https://wormicloud.textpressolab.com.
You can also read the paper that describes Wormicloud.
New chapter in WormBook, GENETICS – Starvation responses
Check out the new chapter in WormBook, GENETICS, Starvation Responses Throughout the Caenorhabditis elegans Life Cycle, by L. Ryan Baugh and Patrick Hu.
Paper of Interest: Application of Transcriptional Gene Modules to Analysis of Caenorhabditis elegans’ Gene Expression Data
Check out this paper that describes a tool to interrogate genes, gene regulatory regions and gene sets in multiple ways.
New chapter in WormBook, GENETICS – Behavioral States
Check out the new chapter in WormBook, GENETICS – Behavioral States by Steven W. Flavell, David M. Raizen and Young-Jai You.